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changing column values in tab delaminated file with awk without changing values in other columns

score 89 · Answer 1 · 2023-04-06T21:47:58.797000

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changing column values in tab delaminated file with awk without changing values in other columns

89 views Asked by Maryam Ahmadi Jeshvaghane At 06 April 2023 at 21:47

score 88 · Answer 2 · 2023-03-21T12:59:37.250000

htseq-count does not generate read counts as expected

88 views Asked by Allan Okwaro At 21 March 2023 at 12:59

score 117 · Answer 3 · 2023-03-08T12:28:09.883000

Bash code with if/else/fi and awk/perl regexps does work outside snakemake but not inside a snakemake rule

117 views Asked by apposada At 08 March 2023 at 12:28

score 74 · Answer 4 · 2023-02-02T15:19:39.663000

AWK replace full string in TABLE2 according to TABLE1

74 views Asked by Martin Kovář At 02 February 2023 at 15:19

score 145 · Answer 5 · 2022-12-27T12:23:03.837000

sed using while loop is very slow

145 views Asked by Mendel At 27 December 2022 at 12:23

score 36 · Answer 6 · 2022-11-16T14:25:36.513000

Handleing gff file from MISA

36 views Asked by Bách Nguyễn At 16 November 2022 at 14:25

score 53 · Answer 7 · 2022-10-13T21:44:58.247000

Iterating through Pandas dataframe and dictionary items

53 views Asked by Iacopo Passeri At 13 October 2022 at 21:44

score 196 · Answer 8 · 2022-06-23T21:39:33.073000

How to print fields containing specific substrings with awk?

196 views Asked by Gawain At 23 June 2022 at 21:39

score 1995 · Answer 9 · 2022-05-16T17:43:02.307000

Biopython parsing over gff features to extract CDS

1.9k views Asked by Robbe At 16 May 2022 at 17:43

score 56 · Answer 10 · 2021-03-02T12:33:24.063000

Adding data to a dataframe based on groups

56 views Asked by Morten At 02 March 2021 at 12:33

score 192 · Answer 11 · 2021-03-01T07:53:13.380000

Sed function in shell applied to all .gff files in a directory

192 views Asked by Morten At 01 March 2021 at 07:53

score 49 · Answer 12 · 2020-11-18T19:08:45.937000

Problem in merging a gff file and a csv file in R

49 views Asked by user1567654 At 18 November 2020 at 19:08

score 239 · Answer 13 · 2020-04-23T11:12:45.273000

Bcbio-gff File creation issue

239 views Asked by Felix Jaeger At 23 April 2020 at 11:12

score 1438 · Answer 14 · 2020-03-28T09:51:57.520000

Cell value to column name in pandas

1.4k views Asked by Saraha At 28 March 2020 at 09:51

score 164 · Answer 15 · 2020-03-04T02:14:51.053000

HTSeq-count is returning 0 for every gene, instead of expression value

164 views Asked by sdshinghal At 04 March 2020 at 02:14

score 96 · Answer 16 · 2019-11-25T10:42:26.933000

How to convert output of Emboss:Palindrome into gff/bed file (perl)

96 views Asked by Papaya At 25 November 2019 at 10:42

score 609 · Answer 17 · 2019-09-27T15:23:11.750000

How to convert Ensembl .gff3 to 12-column .bed

609 views Asked by Dysnomia At 27 September 2019 at 15:23

score 45 · Answer 18 · 2019-03-22T04:52:01.367000

What kind of error should be checked by a validator while validating biological file formats like GFF and FASTA

45 views Asked by Deepak Singh At 22 March 2019 at 04:52

score 157 · Answer 19 · 2019-01-14T21:31:06.633000

How can I find the number of the first base of a gene in a FASTA file?

157 views Asked by kdickson At 14 January 2019 at 21:31

score 622 · Answer 20 · 2018-07-24T16:51:56.123000

Convert String array to JSONArray

622 views Asked by biocode At 24 July 2018 at 16:51

TechQA.

List Question

changing column values in tab delaminated file with awk without changing values in other columns

htseq-count does not generate read counts as expected

Bash code with if/else/fi and awk/perl regexps does work outside snakemake but not inside a snakemake rule

AWK replace full string in TABLE2 according to TABLE1

sed using while loop is very slow

Handleing gff file from MISA

Iterating through Pandas dataframe and dictionary items

How to print fields containing specific substrings with awk?

Biopython parsing over gff features to extract CDS

Adding data to a dataframe based on groups

Sed function in shell applied to all .gff files in a directory

Problem in merging a gff file and a csv file in R

Bcbio-gff File creation issue

Cell value to column name in pandas

HTSeq-count is returning 0 for every gene, instead of expression value

How to convert output of Emboss:Palindrome into gff/bed file (perl)

How to convert Ensembl .gff3 to 12-column .bed

What kind of error should be checked by a validator while validating biological file formats like GFF and FASTA

How can I find the number of the first base of a gene in a FASTA file?

Convert String array to JSONArray

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