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Combine multiple VCF files into one large VCF file

score 2532 · Answer 1 · 2025-01-06 13:26:36

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Combine multiple VCF files into one large VCF file

2.5k views Asked by The Great At 06 January 2025 at 13:26

score 124 · Answer 2 · 2024-12-07 17:20:56

Parse .bgen files using HAIL without loading data on a single node

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score 381 · Answer 3 · 2025-01-06 12:05:12

Unable to find the internal logging class: java.lang.NoClassDefFoundError: org/apache/spark/internal/Logging$class

381 views Asked by Abhishek Shakya At 06 January 2025 at 12:05

score 126 · Answer 4 · 2024-12-07 17:18:38

Problems for Hail0.2 working on Azure DataBrick

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score 2443 · Answer 5 · 2024-12-07 17:23:46

spark-submit error: Invalid maximum heap size: -Xmx4g --jars, but enough of memory on the system

2.4k views Asked by Nikita Vlasenko At 07 December 2024 at 17:23

score 48 · Answer 6 · 2024-12-07 17:20:55

Using ipython on a different linux account: command gets stuck

48 views Asked by Nikita Vlasenko At 07 December 2024 at 17:20

score 125 · Answer 7 · 2024-12-07 17:20:54

hail.utils.java.FatalError: IllegalStateException: unread block data

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score 543 · Answer 8 · 2024-12-07 17:17:42

Run Luigi task that depends on another task

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score 50 · Answer 9 · 2024-12-07 17:20:13

Access different type of preset target location in Luigi

50 views Asked by Nikita Vlasenko At 07 December 2024 at 17:20

score 147 · Answer 10 · 2024-12-07 17:23:43

Py4JJavaError: An error occurred while calling z:is.hail.backend.spark.SparkBackend.apply

147 views Asked by Kooglee At 07 December 2024 at 17:23

TechQA.

List Question

Combine multiple VCF files into one large VCF file

Parse .bgen files using HAIL without loading data on a single node

Unable to find the internal logging class: java.lang.NoClassDefFoundError: org/apache/spark/internal/Logging$class

Problems for Hail0.2 working on Azure DataBrick

spark-submit error: Invalid maximum heap size: -Xmx4g --jars, but enough of memory on the system

Using ipython on a different linux account: command gets stuck

hail.utils.java.FatalError: IllegalStateException: unread block data

Run Luigi task that depends on another task

Access different type of preset target location in Luigi

Py4JJavaError: An error occurred while calling z:is.hail.backend.spark.SparkBackend.apply

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