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Creating design matrix for microarray experiment in LIMMA

score 289 · Answer 1 · 2017-01-08 18:16:03

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TechQA.

List Question

Creating design matrix for microarray experiment in LIMMA

Limma/DESeq2 for unbalanced nested design (paired samples)

Difficulty Reproducing log Fold Change Calculation Using tmod Package in R

LIMMA: design matrices and procedures

How do I tell R package Limma what to use as "targets" in read.idat()?

Limma package for gene expression

How to define degrees of freedom in eBayes function

In R, how do I define model contrasts for comparing two conditions relative to a common control?

Reorder dendrogram in R

Negative values after Limma's batch effect correction

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