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structures corresponding to metastable states in python

score 34 · Answer 1 · 2023-11-07T22:18:43.003000

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structures corresponding to metastable states in python

34 views Asked by Giovanni Wences At 07 November 2023 at 22:18

score 103 · Answer 2 · 2023-01-08T10:31:35.873000

Regarding tau_max in Survival Probability calculation using MDAnalysis python package

103 views Asked by Alvea Tasneem At 08 January 2023 at 10:31

score 48 · Answer 3 · 2022-10-30T10:51:33.860000

I have a DX file containing PME data, I want to plot an average potential profile through python code

48 views Asked by Coldy_14 At 30 October 2022 at 10:51

score 110 · Answer 4 · 2022-10-27T19:24:42.910000

Understanding Density object obtained from MDAnalaysis DensityAnalysis

110 views Asked by Jovey Osagie At 27 October 2022 at 19:24

score 255 · Answer 5 · 2022-08-24T16:38:16.217000

Iterating over molecules from LAMMPS dumpfile using MDAnalysis

255 views Asked by ludwig_boltzplatz At 24 August 2022 at 16:38

score 270 · Answer 6 · 2022-07-13T10:04:01.410000

MDAnalysis: Trajectories saved from Readers of the same Universe are incorrect

270 views Asked by Francho Nerín Fonz At 13 July 2022 at 10:04

score 85 · Answer 7 · 2022-06-24T18:05:38.687000

Why is the curve fitting in MDAnalysis persistence length not working?

85 views Asked by Peggy Brooks At 24 June 2022 at 18:05

score 56 · Answer 8 · 2022-04-24T14:12:44.123000

TPRParser in MDAnanlysis has no attribute 'parser'?

56 views Asked by Advaita At 24 April 2022 at 14:12

score 1294 · Answer 9 · 2022-02-28T13:37:36.380000

How to calculate center of mass of proteins using MDAnalysis?

1.2k views Asked by Advaita At 28 February 2022 at 13:37

score 788 · Answer 10 · 2022-01-19T14:37:57.310000

How to iterate efficiently through MDAnalysis trajectory and save residue attribute time series?

788 views Asked by Francho Nerín Fonz At 19 January 2022 at 14:37

score 115 · Answer 11 · 2022-01-06T22:36:27.697000

MDAnalysis how to index the charge?

115 views Asked by Confused_scientist At 06 January 2022 at 22:36

score 62 · Answer 12 · 2021-12-23T09:40:35.233000

MD analysis using Python

62 views Asked by Viswa Vittal At 23 December 2021 at 09:40

score 136 · Answer 13 · 2021-12-21T16:59:07.853000

Data analysis - MD analysis Python

136 views Asked by Viswa Vittal At 21 December 2021 at 16:59

score 405 · Answer 14 · 2021-12-07T07:17:43.817000

MDAnalysis comparing position of ion in trajectory to previous ts

405 views Asked by Confused_scientist At 07 December 2021 at 07:17

score 216 · Answer 15 · 2021-08-09T23:41:32.143000

Getting the charge of a single atom, per loop in MD Analysis

216 views Asked by Confused_scientist At 09 August 2021 at 23:41

score 263 · Answer 16 · 2021-06-30T18:24:12.410000

How to use atomselect to specify atomNumbers/Index position in a pdb file for MDAnalysis?

263 views Asked by Confused_scientist At 30 June 2021 at 18:24

score 1015 · Answer 17 · 2021-03-16T17:26:01.920000

Using MDAnalysis to extract coordinates in an array from pdb

1k views Asked by German Barcenas At 16 March 2021 at 17:26

score 1020 · Answer 18 · 2021-03-10T22:35:01.443000

Install and Import MDAnalysis on Google Colaboratory for Python? Problems

1k views Asked by DJ Boltzmann At 10 March 2021 at 22:35

score 654 · Answer 19 · 2021-02-23T19:55:26.187000

Obtaining Radial Distribution Functions using MDAnalysis

654 views Asked by megamence At 23 February 2021 at 19:55

score 231 · Answer 20 · 2020-10-19T15:53:26.823000

NameError: name 'pbc' is not defined

231 views Asked by Pulok Kanti Deb At 19 October 2020 at 15:53

TechQA.

List Question

structures corresponding to metastable states in python

Regarding tau_max in Survival Probability calculation using MDAnalysis python package

I have a DX file containing PME data, I want to plot an average potential profile through python code

Understanding Density object obtained from MDAnalaysis DensityAnalysis

Iterating over molecules from LAMMPS dumpfile using MDAnalysis

MDAnalysis: Trajectories saved from Readers of the same Universe are incorrect

Why is the curve fitting in MDAnalysis persistence length not working?

TPRParser in MDAnanlysis has no attribute 'parser'?

How to calculate center of mass of proteins using MDAnalysis?

How to iterate efficiently through MDAnalysis trajectory and save residue attribute time series?

MDAnalysis how to index the charge?

MD analysis using Python

Data analysis - MD analysis Python

MDAnalysis comparing position of ion in trajectory to previous ts

Getting the charge of a single atom, per loop in MD Analysis

How to use atomselect to specify atomNumbers/Index position in a pdb file for MDAnalysis?

Using MDAnalysis to extract coordinates in an array from pdb

Install and Import MDAnalysis on Google Colaboratory for Python? Problems

Obtaining Radial Distribution Functions using MDAnalysis

NameError: name 'pbc' is not defined

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