AWS Amplify and AppSync custom domain

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I have created and associated a custom domain name to access my AppSync API using the web interface. When I run amplify pull and regenerate the aws-exports.js file the aws_appsync_graphqlEndpoint does not reflect the custom domain name. How can i make it refer to my custom domain without modifying it by hand?

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Martin Slater On BEST ANSWER

AWS Support have said that this is currently not possible using the Amplify CLI