I am looking to AllenSDK library. Can one extract time series (voltage of the cell in time) of the recordings they did to estimate various parameters? I can find how to access the parameters but I am really interested in their traces. Anyone can help with that?
Extracting time series from AllenSDK ephy data base
77 views Asked by Marta Gajowa At
1
There are 1 answers
Related Questions in PYTHON
- How to store a date/time in sqlite (or something similar to a date)
- Instagrapi recently showing HTTPError and UnknownError
- How to Retrieve Data from an MySQL Database and Display it in a GUI?
- How to create a regular expression to partition a string that terminates in either ": 45" or ",", without the ": "
- Python Geopandas unable to convert latitude longitude to points
- Influence of Unused FFN on Model Accuracy in PyTorch
- Seeking Python Libraries for Removing Extraneous Characters and Spaces in Text
- Writes to child subprocess.Popen.stdin don't work from within process group?
- Conda has two different python binarys (python and python3) with the same version for a single environment. Why?
- Problem with add new attribute in table with BOTO3 on python
- Can't install packages in python conda environment
- Setting diagonal of a matrix to zero
- List of numbers converted to list of strings to iterate over it. But receiving TypeError messages
- Basic Python Question: Shortening If Statements
- Python and regex, can't understand why some words are left out of the match
Related Questions in ALLEN-SDK
- allen-sdk:Visual Coding – Neuropixels How to know the name of recorded in anatomical structures
- How to filter out a hemisphere of Allen Brain Atlas data with the BSB?
- Where can I download the image or video stimuli for the visual coding experiments (allen-sdk)?
- How to parse a dictionary representing a dendrogram to create another dictionary representing all parent and child nodes?
- How do I find the L0 regularization events for a particular cell ID?
- Extracting time series from AllenSDK ephy data base
- Get more of the metadata from the Neurotransmitter study using Allen SDK
- Pulling microarray data by MNI coordinates
- list of all valid parameters and criteria that can be used in RMA queries
- Where can I find data that used to be returned by allensdk.CellTypesCache.get_cells()
- How to get the cluster to which a cell belongs, using AllenSDK?
- Get the list of fitted GLIF model ids
- TypeError while running Cell Types notebook from AllenSDK
- allen-sdk get_flourescence_timeStamps
- Allen Brain Observatory - get_stimulus_template doesn't work with static_gratings
Popular Questions
- How do I undo the most recent local commits in Git?
- How can I remove a specific item from an array in JavaScript?
- How do I delete a Git branch locally and remotely?
- Find all files containing a specific text (string) on Linux?
- How do I revert a Git repository to a previous commit?
- How do I create an HTML button that acts like a link?
- How do I check out a remote Git branch?
- How do I force "git pull" to overwrite local files?
- How do I list all files of a directory?
- How to check whether a string contains a substring in JavaScript?
- How do I redirect to another webpage?
- How can I iterate over rows in a Pandas DataFrame?
- How do I convert a String to an int in Java?
- Does Python have a string 'contains' substring method?
- How do I check if a string contains a specific word?
Popular Tags
Trending Questions
- UIImageView Frame Doesn't Reflect Constraints
- Is it possible to use adb commands to click on a view by finding its ID?
- How to create a new web character symbol recognizable by html/javascript?
- Why isn't my CSS3 animation smooth in Google Chrome (but very smooth on other browsers)?
- Heap Gives Page Fault
- Connect ffmpeg to Visual Studio 2008
- Both Object- and ValueAnimator jumps when Duration is set above API LvL 24
- How to avoid default initialization of objects in std::vector?
- second argument of the command line arguments in a format other than char** argv or char* argv[]
- How to improve efficiency of algorithm which generates next lexicographic permutation?
- Navigating to the another actvity app getting crash in android
- How to read the particular message format in android and store in sqlite database?
- Resetting inventory status after order is cancelled
- Efficiently compute powers of X in SSE/AVX
- Insert into an external database using ajax and php : POST 500 (Internal Server Error)
Please refer to https://allensdk.readthedocs.io/en/latest/cell_types.html#feature-extraction to get dataset and the sweet metadata. Then you can access sweep timeseries like so: